RNA-Seq of Aliivibrio fischeri ES114 - SRA

SRX11978479: RNA-Seq of Aliivibrio fischeri ES114
1 ILLUMINA (Illumina HiSeq 4000) run: 16.9M spots, 846.2M bases, 271.7Mb downloads

Design: Illumina Scriptseq

Submitted by: UNC Chapel Hill

Study: Para-aminobenzoic acid, calcium and c-di-GMP induce formation of cohesive, Syp-polysaccharide-dependent biofilms in Vibrio fischeri

PRJNA759339 • SRP335109 • All experiments • All runs

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Transcriptomes of Vibrio fischeri ES114 were collected under three conditions: (1) TBS culture, (2) TBS culture plus calcium, and (3) TBS culture plus calcium and 4-aminobenzoic acid (PABA). RNA was collected at 4 and 8 hours for each treatment condition, and analyzed to determine what genes are involved in syp and cellulose biofilm formation when exposed to calcium and PABA.

Sample:

SAMN21163385 • SRS9986778 • All experiments • All runs

Organism: Aliivibrio fischeri ES114

Library:

Name: TC_8hr_2

Instrument: Illumina HiSeq 4000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RANDOM PCR

Layout: PAIRED

Runs: 1 run, 16.9M spots, 846.2M bases, 271.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR15682186	16,923,234	846.2M	271.7Mb	2021-09-01

ID:: 15896865

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